Explore projects

This is the codebase for PDBe-KB REST API service

Workflows as a Service

This project contains an API that serves as a proxy of elasticsearch for the interface. It handles the caching, usage statistics, contexts and standardisation of properties.

Simple Python client to upload images on Openstack.

Test libraries and harnesses used for running the Ensembl test suite

Quick demonstration of server that displays indications sections of DailyMed structured product labels (SPLs, i.e. drug labels). The SPLs are exposed in their own URLs which serve as a static location so that they can be annotated with hypothes.is.

Joint workshop on programmatic access and web components offered by PDBe and UniProt

Project that is able to generate subsets of indexes in ChEMBL. Useful for handling queries that involve many terms.

This project defines a delayed job that runs biological sequence searches (BLAST).

EMBL publications annual report

HAproxy image that autoreconfigures itself when used in Docker Cloud

ChEBI database management

Europe PMC Annotated Fulltext Corpus of 300 articles for core entity types (Gene/Proteins, Diseases and Species)