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Onboarding tools, design templates, code and practical resources.

NOTE - DO NOT COMMIT ANYTHING IN THIS REPO, THIS IS MIRROR REPO OF GITHUB. PLEASE COMMIT CHANGES IN GITHUB ONLY.

Docker projects for bioinformatics tools

'Docker Swarm' implementation of Ensembl Hive Meadow interface

This package complements the performance evaluation for the manuscript entitled "Use of viral motif mimicry improves the proteome-wide discovery of human linear motifs"

File conversion utility for the ftp redesign project

This project defines a delayed job that generates CSV, TSV and SDF Files of subsets of data in ChEMBL.

Quick demonstration of server that displays indications sections of DailyMed structured product labels (SPLs, i.e. drug labels). The SPLs are exposed in their own URLs which serve as a static location so that they can be annotated with hypothes.is.

A few starter examples of ansible playbooks, to show features and how they work together. See http://galaxy.ansible.com for example roles from the Ansible community for deploying many popular applications.

Test libraries and harnesses used for running the Ensembl test suite

HTCondor Meadow for Ensembl Hive

Workflows as a Service

VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies