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Europe PMC Annotated Fulltext Corpus of 300 articles for core entity types (Gene/Proteins, Diseases and Species)
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Flat file format specification and java API for sequence data.
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Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.
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petsalakilab / centools
OtherCEN-tools is an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens.
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A library for locating and annotating plain text in HTML
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ebiwd / rthelper
Apache License 2.0This script provides a number of user enhancements to the default interface of RT at EBI, to enable quicker and easier management of tickets.
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This is the python implementation of CEN-tools, an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens
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In this repository, I am going to share all the data and codes required to reproduce my library gene selection steps for the 2D CRISPR Project (Colorectal and Breast cancer cell lines)
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Manuscript submission system project (Europe PMC plus)
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Benchmarking dataset of PDB structures (various molecule types, experimental methods, weird cases etc.).
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