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XML schemas published by ENA.

Explore s3 api on controller side

ENA read tools

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

Data Model including dao and repositories of the PDX Finder app

Test Maven project with Gitlab CI (With no external Artefactory configured)

Core ingest service components, including minimal metadata representation and caching

IMPC publications curation app

Zuul Proxy for Legacy Apps

This repo will be having common components used across multiple services

Core library to generate GA4GH JWT Passports

Common library to interact with fire DOS V3 API

EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource

A front end for the EGA data API. Required for ELIXIR integration. Provides Load Balancing, Traffic Shaping, Automated Retries.

A fork of HTSJDK with EGA specific enhancements