Explore projects

Metadata API for ensembl 2020

VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies

Project that is able to generate subsets of indexes in ChEMBL. Useful for handling queries that involve many terms.

A nextflow pipeline for polygenic score calculation

Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.

ChEBI database management

ChEBI data in different formats: TSV, SDF and SQL Dumps

User-friendly nextflow workflow and web server to derive phenotype-specific cell signalling networks by integrating paired phenotype and transcriptomic data.

HoloFood is a project investigating sustainable food production through hologenomics. This Django app is the data portal where samples and other datasets from the project are made publicly available.

EnsembleFlex - Flexibility Analysis of Structure Ensembles

Creates pages for embl.org/jobs/position/{id}

Webin command line submission interface.

This project defines a Job that orchestrates the search y IDs process

This project contains an API that serves as a proxy of elasticsearch for the interface. It handles the caching, usage statistics, contexts and standardisation of properties.

Frontend code for the new version of ChEBI