Explore projects
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ETL to migrate data from the old database to the new one
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pgscatalog / Pygscatalog
Apache License 2.0Updated -
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ChEMBL / EUbOPEN / EUbOPEN Web
Apache License 2.0This project contains the code for the EUbOPEN website.
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Microbiome Informatics / emg-viral-pipeline
Apache License 2.0VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
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Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.
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ChEBI data in different formats: TSV, SDF and SQL Dumps
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This project contains an API that serves as a proxy of elasticsearch for the interface. It handles the caching, usage statistics, contexts and standardisation of properties.
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UniProt Public / UniFIRE
Apache License 2.0Updated -
Project to perform the data indexation process to the ChEBI platform
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Project that is able to generate subsets of indexes in ChEMBL. Useful for handling queries that involve many terms.
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This project defines a Job that orchestrates the search y IDs process
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