Explore projects

A nextflow pipeline for polygenic score calculation

Metadata API for ensembl 2020

Tools to load data into the ChEMBl Elastic Search cluster, and replicate it.

Project to perform the data indexation process to the ChEBI platform

RNAcentral website source code

ETL to migrate data from the old database to the new one

VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies

This project contains an API that serves as a proxy of elasticsearch for the interface. It handles the caching, usage statistics, contexts and standardisation of properties.

This is the codebase for PDBe-KB REST API service

The Ensembl Core Perl API and SQL schema

Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.

This project defines a delayed job that generates CSV, TSV and SDF Files of subsets of data in ChEMBL.