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Onboarding tools, design templates, code and practical resources.

NOTE - DO NOT COMMIT ANYTHING IN THIS REPO, THIS IS MIRROR REPO OF GITHUB. PLEASE COMMIT CHANGES IN GITHUB ONLY.

Miscellaneous R scripts to do: clone analysis via GBC, gene expression analysis on Seurat, cell-cell interactions analysis with CellPhoneDb, gene network inference with SCENIC, demultiplexing with MULTI-Seq barcodes

Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.

Ensembl 2020 client

Flat file format specification and java API for sequence data.

This project contains the new developments for the main ChEMBL interface using Vue JS. It defines a Nuxt js app that will be used to make a smooth transition between the current code and new developments using Vue JS.

Web components shared between apps. Can be used as a git submodule, while we improve the packaging.

This project contains an API that serves as a proxy of elasticsearch for the interface. It handles the caching, usage statistics, contexts and standardisation of properties.

Tools to load data into the ChEMBl Elastic Search cluster, and replicate it.

Frontend code for the new version of ChEBI

IMPC statistical pipeline docker image

Language agnostic RESTful data access to Ensembl data over HTTP

Common library to interact with fire DOS V3 API

A basic Python-based EGA download client