Adding support for NCBI blast DB creation. This is not rolled into the main...
Adding support for NCBI blast DB creation. This is not rolled into the main distro yet but is available as a separate pipeline. Existing indexers have had some functionality moved down the stack to avoid massive code duplication
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- modules/Bio/EnsEMBL/Pipeline/Base.pm 9 additions, 0 deletionsmodules/Bio/EnsEMBL/Pipeline/Base.pm
- modules/Bio/EnsEMBL/Pipeline/FASTA/BlastIndexer.pm 163 additions, 0 deletionsmodules/Bio/EnsEMBL/Pipeline/FASTA/BlastIndexer.pm
- modules/Bio/EnsEMBL/Pipeline/FASTA/BlatIndexer.pm 1 addition, 4 deletionsmodules/Bio/EnsEMBL/Pipeline/FASTA/BlatIndexer.pm
- modules/Bio/EnsEMBL/Pipeline/FASTA/NcbiBlastIndexer.pm 82 additions, 0 deletionsmodules/Bio/EnsEMBL/Pipeline/FASTA/NcbiBlastIndexer.pm
- modules/Bio/EnsEMBL/Pipeline/FASTA/NcbiBlastReIndexer.pm 81 additions, 0 deletionsmodules/Bio/EnsEMBL/Pipeline/FASTA/NcbiBlastReIndexer.pm
- modules/Bio/EnsEMBL/Pipeline/FASTA/WuBlastIndexer.pm 5 additions, 96 deletionsmodules/Bio/EnsEMBL/Pipeline/FASTA/WuBlastIndexer.pm
- modules/Bio/EnsEMBL/Pipeline/PipeConfig/NcbiBlastReIndexer_conf.pm 88 additions, 0 deletions...io/EnsEMBL/Pipeline/PipeConfig/NcbiBlastReIndexer_conf.pm
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