Commits · 2510da124316ffbc2352c0c4c0cd630cd1672975 · ensembl-gh-mirror / ensembl-hive · GitLab

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This project is mirrored from https://:*****@github.com/Ensembl/ensembl-hive.git. Pull mirroring updated 29 minutes ago.

Dec 16, 2013
- New documentation about "output_db" · 2510da12
  Matthieu Muffato authored 11 years ago
  
  2510da12
- Clearer documentation for DatabaseDumper · 6d92485a
  Matthieu Muffato authored 11 years ago
  
  6d92485a
Dec 12, 2013
- further markdowning of unmarkdownable · c8cb331d
  ens-lg4 authored 11 years ago
  
  c8cb331d
- lets see if it was already markdown... · 1169d031
  Leo Gordon authored 11 years ago
  
  1169d031
Dec 11, 2013
- added short summary of Git commits between 27.Sep-11.Dec to Changeog for CVS-only users · 6ef091b6
  Leo Gordon authored 11 years ago
  
  lg4_pre_rel75_2013_12_11_timeline_ranked_claim
  
  6ef091b6
- updated schema diagram (PNG) and description (HTML) · b48d23cc
  Leo Gordon authored 11 years ago
  
  b48d23cc
Dec 09, 2013
- bugfix: sqlite mode now works again · e747d057
  Leo Gordon authored 11 years ago
  
  e747d057
- added Apache 2.0 license to all files · 61deb3f4
  Leo Gordon authored 11 years ago
  
  61deb3f4
Dec 04, 2013
- schema_change: switched some foreign keys to ON DELETE CASCADE (thanks, Harpreet!) · a55a3d94
  Leo Gordon authored 11 years ago
  
  sql_schema_56_start
  
  a55a3d94
- Updated the list of dependencies · ef21ba28
  Matthieu Muffato authored 11 years ago
  
  ef21ba28
- Added info on how to run lsf_report.pl and generate_timeline.pl · 3923647b
  Matthieu Muffato authored 11 years ago
  
  3923647b
- Removed the option to use a logscale axis, and added a grid in the background · c5c05c40
  Matthieu Muffato authored 11 years ago
  
  c5c05c40
- Another set of rounding errors · 4b997c5d
  Matthieu Muffato authored 11 years ago
  
  4b997c5d
- Added a mode to plot the number of pending workers for each analysis · cbba7500
  Matthieu Muffato authored 11 years ago
  
  cbba7500
- Neater way to add/substract a worker · 9f836d87
  Matthieu Muffato authored 11 years ago
  
  9f836d87
- Added a mode to plot the amount of unused CPU cores each analysis · e9d7e723
  Matthieu Muffato authored 11 years ago
  
  e9d7e723
- "Unused memory" instead of "Wasted memory" · 9829697c
  Matthieu Muffato authored 11 years ago
  
  9829697c
- Pulls in the time information (pending time, cpu usage, lifespan) · 8416064b
  Matthieu Muffato authored 11 years ago
  
  8416064b
- Improved the documentation · 6cbcb64f
  Matthieu Muffato authored 11 years ago
  
  6cbcb64f
- Added "verbose" mode · e75e4084
  Matthieu Muffato authored 11 years ago
  
  e75e4084
- Not valid any more when counting the wasted memory (rounding errors) · 6b00af75
  Matthieu Muffato authored 11 years ago
  
  6b00af75
- Added a mode to plot the amount of wasted memory by each analysis · abdc13eb
  Matthieu Muffato authored 11 years ago
  
  abdc13eb
- Also store the meadow_name in lsf_report · 85cd35e0
  Matthieu Muffato authored 11 years ago
  
  85cd35e0
- The unit conversion table is constant · ea2e41bc
  Matthieu Muffato authored 11 years ago
  
  ea2e41bc
- dbname may be undefined · 572ee734
  Matthieu Muffato authored 11 years ago
  
  572ee734
- Added a mode to plot the number of CPU cores used by each analysis · cf92f383
  Matthieu Muffato authored 11 years ago
  
  cf92f383
- Added a mode to plot the RAM used by each analysis · f2e3584b
  Matthieu Muffato authored 11 years ago
  
  f2e3584b
Dec 03, 2013
- create a separate directory layer to group log files of the same iteration · 7c229e07
  Leo Gordon authored 11 years ago
  
  7c229e07
- separate output files by LSF_job_id and LSF_jobarray_index · 18cfd577
  Leo Gordon authored 11 years ago
  
  18cfd577
- simplify logging of submission output/error streams · 18417dbf
  Leo Gordon authored 11 years ago
  
  18417dbf
Nov 27, 2013
- s/profile/timeline/g · b2155f15
  Matthieu Muffato authored 11 years ago
  
  b2155f15
- Gets the birth/death events instead of sampling the database. The "NOTHING"... · f731a413
  Matthieu Muffato authored 11 years ago
```
Gets the birth/death events instead of sampling the database. The "NOTHING" curve is not needed any more
```
  f731a413
- Reads the data from the database once at the beginning, and process it offline · 819d3850
  Matthieu Muffato authored 11 years ago
  
  819d3850
- "DarkSlateGray" looks better for the "NOTHING" curve · 7320c706
  Matthieu Muffato authored 11 years ago
  
  7320c706
- Added documentation · d69de348
  Matthieu Muffato authored 11 years ago
  
  d69de348
- GNUplot is now controlled via Chart::Gnuplot · 06ab0afc
  Matthieu Muffato authored 11 years ago
  
  06ab0afc
- Improved the GNU-plot output · dd42e6ff
  Matthieu Muffato authored 11 years ago
  
  dd42e6ff
- Only gnuplot has to know about the filtered analysis, the CSV file should... · e9962ffd
  Matthieu Muffato authored 11 years ago
```
Only gnuplot has to know about the filtered analysis, the CSV file should still contain all the data
```
  e9962ffd
- First version of a script to generate the analysis profile of a pipeline · 3355deb8
  Matthieu Muffato authored 11 years ago
  
  3355deb8
Nov 25, 2013
- schema_change: detect and register RELOCATED events that used to mess up... · 4751bf0a
  Leo Gordon authored 11 years ago
```
schema_change: detect and register RELOCATED events that used to mess up things on LSF 9.0 ("job rescheduled" in LSF parlance)
```
  sql_schema_55_start
  
  4751bf0a