Commits · f72c0cb8f1d3fe41a5c396954a3e2f24855a110f · ensembl-gh-mirror / ensembl-hive

This project is mirrored from https://:*****@github.com/Ensembl/ensembl-hive.git. Pull mirroring updated 20 minutes ago.

Apr 11, 2011
- renamed fetch_from_analysis_id_branch_code method into... · f72c0cb8
  Leo Gordon authored 13 years ago
```
renamed fetch_from_analysis_id_branch_code method into fetch_all_by_from_analysis_id_and_branch_code
```
  f72c0cb8
Mar 30, 2011
- bugfix : check whether branch_name is defined rather than false · c9396877
  Leo Gordon authored 13 years ago
  
  c9396877
Mar 29, 2011
- make sure what is passed into NakedTableAdaptor is a hash · 6163cc8e
  Leo Gordon authored 13 years ago
  
  6163cc8e
- do not import warning() to avoid the clash · 1f53bd34
  Leo Gordon authored 13 years ago
  
  1f53bd34
- fixed a bug where MySQLTransfer did not reach automatic dataflow on success · 4af6b1a7
  Leo Gordon authored 13 years ago
  
  4af6b1a7
Mar 26, 2011
- trying to follow EnsEMBL API convention about "fetch_by" and "fetch_all_by" · 2778c93e
  Leo Gordon authored 13 years ago
  
  2778c93e
Mar 24, 2011
- mnemonic branch_names (slightly tested), 'ANYFAILURE' dataflow (not yet tested) · 19dd6b12
  Leo Gordon authored 13 years ago
  
  19dd6b12
Mar 23, 2011
- timing in minutes as well · 932a8c80
  Leo Gordon authored 13 years ago
  
  932a8c80
Mar 18, 2011
- one PREPARE statement per dataflow-to-table call (so works for array of... · c26b0907
  Leo Gordon authored 14 years ago
```
one PREPARE statement per dataflow-to-table call (so works for array of output_ids with identical structure)
```
  c26b0907
Mar 17, 2011
- documented changes made during rel62 · 30a33144
  Leo Gordon authored 14 years ago
  
  lg4_post_rel_62_20110317
  
  30a33144
Mar 16, 2011
- modified some procedures according to Greg's suggestions, added some usage examples · 915fe8d5
  Leo Gordon authored 14 years ago
  
  915fe8d5
- formatting · e70ab3a5
  Leo Gordon authored 14 years ago
  
  e70ab3a5
- time your analyses with a procedure · 916bc707
  Leo Gordon authored 14 years ago
  
  916bc707
Mar 12, 2011
- Only specify the fill colour not just the colour which makes for a clearer graph · c4120291
  Andy Yates authored 14 years ago
  
  c4120291
Mar 10, 2011
- just a small tweak in the header · d527b78b
  Leo Gordon authored 14 years ago
  
  d527b78b
- Missing #! line · 37b4eff4
  Andy Yates authored 14 years ago
  
  37b4eff4
- GraphVIz based image generation of any hive database · 6da46e7c
  Andy Yates authored 14 years ago
  
  6da46e7c
Mar 09, 2011
- docs show how to use SystemCmd for debugging · b1626810
  Leo Gordon authored 14 years ago
  
  b1626810
- schema version change · 2d8e5f7e
  Leo Gordon authored 14 years ago
  
  2d8e5f7e
Mar 02, 2011
- make SystemCmd disconnect from the database for the duration of execution of its command · 1f312613
  Leo Gordon authored 14 years ago
  
  1f312613
- a new experimental -keep_alive flag requested by Bethan. Not yet tested · 850cfcc6
  Leo Gordon authored 14 years ago
  
  850cfcc6
Feb 01, 2011
- ensembl-hive_HEAD/scripts/init_pipeline.pl · d1c40a4f
  Miguel Pignatelli authored 14 years ago
  
  d1c40a4f
- deleted *eval* statement when requiring configuration module · b6b7510e
  Miguel Pignatelli authored 14 years ago
  
  b6b7510e
Jan 27, 2011
- warning about running a pipeline without a name added · a79c6f5d
  Leo Gordon authored 14 years ago
  
  a79c6f5d
Jan 21, 2011
- forgot to add a foreign key on semaphored_job_id · 80ff4d7d
  Leo Gordon authored 14 years ago
  
  80ff4d7d
- foreign keys have moved out into a separate file for flexibility · e78646b2
  Leo Gordon authored 14 years ago
  
  e78646b2
- don't disrupt the descending of the structure by early returns · 198ed272
  Leo Gordon authored 14 years ago
  
  198ed272
Jan 20, 2011
- more visual result of sync · 34bb2acd
  Leo Gordon authored 14 years ago
  
  34bb2acd
- patch to add can_be_empty field to analysis_stats and analysis_stats_monitor · 7b84ec87
  Leo Gordon authored 14 years ago
  
  7b84ec87
Jan 19, 2011
- analysis_stats_monitor has to be in sync with analysis_stats, fixed · a20931ae
  Leo Gordon authored 14 years ago
  
  a20931ae
- testing the idea of analyses that can be empty for blocking purposes (it does... · 8f559390
  Leo Gordon authored 14 years ago
```
testing the idea of analyses that can be empty for blocking purposes (it does not block while it is empty)
```
  8f559390
- extending the meta value to TEXT · ea0d0271
  Leo Gordon authored 14 years ago
  
  ea0d0271
- retry 3 times to avoid deadlock situations · 5c52f484
  Leo Gordon authored 14 years ago
  
  5c52f484
- cleanup touch · 07377b4d
  Leo Gordon authored 14 years ago
  
  07377b4d
Jan 14, 2011
- typo · 3a5655a2
  Leo Gordon authored 14 years ago
  
  3a5655a2
- try turning meta_value into TEXT · 4ec364e5
  Leo Gordon authored 14 years ago
  
  4ec364e5
- extend several fields in analysis table to 255 characters · 46cf8a43
  Leo Gordon authored 14 years ago
  
  46cf8a43
Jan 12, 2011
- param_substitute() introduced into MySQLTransfer module · 5622dfba
  Leo Gordon authored 14 years ago
  
  5622dfba
Jan 11, 2011
- quick fix to the problem of array substitution - may need more attn in future · ada2cee9
  Leo Gordon authored 14 years ago
  
  ada2cee9
Jan 10, 2011
- detect incomplete list substitutions · 9a50356c
  Leo Gordon authored 14 years ago
  
  9a50356c