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Commit 53056ee1 authored by Andy Yates's avatar Andy Yates
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Few more example command lines

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......@@ -73,4 +73,12 @@
-reg_conf reg.pm -debug 2 \
-release 67 -species homo_sapiens -sequence_type_list '["dna"]' \
-base_path /path/to/dumps
</code></pre><h3 id="RunningGeneDumping">Running Gene Dumping</h3><pre><code> standaloneJob.pl Bio::EnsEMBL::Pipeline::FASTA::DumpFile \
-reg_conf reg.pm -debug 2 \
-release 67 -species homo_sapiens -sequence_type_list '["cdna"]' \
-base_path /path/to/dumps
</code></pre><h3 id="RunningGeneDumping2">Running Gene Dumping</h3><pre><code> standaloneJob.pl Bio::EnsEMBL::Pipeline::FASTA::DumpFile \
-reg_conf reg.pm -debug 2 \
-release 67 -species homo_sapiens -sequence_type_list '["ncrna"]' \
-base_path /path/to/dumps
</code></pre></body></html>
\ No newline at end of file
......@@ -212,4 +212,20 @@ bc.
-release 67 -species homo_sapiens -sequence_type_list '["dna"]' \
-base_path /path/to/dumps
h3. Running Gene Dumping
bc.
standaloneJob.pl Bio::EnsEMBL::Pipeline::FASTA::DumpFile \
-reg_conf reg.pm -debug 2 \
-release 67 -species homo_sapiens -sequence_type_list '["cdna"]' \
-base_path /path/to/dumps
h3. Running Gene Dumping
bc.
standaloneJob.pl Bio::EnsEMBL::Pipeline::FASTA::DumpFile \
-reg_conf reg.pm -debug 2 \
-release 67 -species homo_sapiens -sequence_type_list '["ncrna"]' \
-base_path /path/to/dumps
\ No newline at end of file
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