Commits · 16056298be74061661d7d34591987c644252abdd · ensembl-gh-mirror / ensembl

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Sep 24, 2012
- Stop returning more than 1 region from the service · 16056298
  Andy Yates authored 12 years ago
  
  16056298
- Added a 'flag' at Genebuilder request to allow them to switch off collection... · f0cdbdea
  Kieron Taylor authored 12 years ago
  f0cdbdea
- Removing phase from this object · 2c09cad0
  Andy Yates authored 12 years ago
  
  2c09cad0
Sep 21, 2012
- [ENSCORESW-262 ]. Customised the Exon summary as hash, gene and transcript... · 5cc8e4fc
  Andy Yates authored 12 years ago
  5cc8e4fc
- [ENSCORESW-261 ]. Edits to allow for easier regulation adaptor creation. Grab... · bbc30a4e
  Andy Yates authored 12 years ago
  bbc30a4e
Sep 18, 2012
- Use numeric equality when comparing references together. See perlref for more details about why · fcfae510
  Andy Yates authored 12 years ago
  
  fcfae510
Sep 17, 2012
- added a get_slices method specific to snp count · e1599698
  Magali Ruffier authored 12 years ago
  e1599698
Sep 14, 2012
- MySQL binary was wrong · ece81978
  Andy Yates authored 12 years ago
  
  ece81978
- Pushing pig specific hacks for the naming of transcripts and the overwriting... · 04b17bfe
  Andy Yates authored 12 years ago
  04b17bfe
- removed debug · 908d0b13
  Magali Ruffier authored 12 years ago
  
  908d0b13
- wrong return type for slices · feccfdea
  Magali Ruffier authored 12 years ago
  
  feccfdea
Sep 13, 2012
- [ENSCORESW-253 ]. Adding a "hack" to temporarily wave the sub sequence remaps if we've got lrgs. · c7ddcadb
  Andy Yates authored 12 years ago
  
  c7ddcadb
Sep 12, 2012
- Fix for parsing files from Ken @ CSHL. ORIGIN was used in another context... · 98358e8d
  Andy Yates authored 12 years ago
  98358e8d
- do not re-run officialnaming when trying to recalculate the display xrefs, it will not work · c2f96695
  Magali Ruffier authored 12 years ago
  
  c2f96695
- Classification bugs spotted by mm14 · c52baf9e
  Andy Yates authored 12 years ago
  
  c52baf9e
Sep 11, 2012
- Added mustela_putorius_furo and xiphophorus_maculatus to the list of species to which we project. · b7b4a0d2
  Rhoda Kinsella authored 12 years ago
  
  b7b4a0d2
- for gene display xref, ignore gene xrefs where uniprot_genename is dependent... · 03bffafe
  Magali Ruffier authored 12 years ago
  03bffafe
- do not use uniprot_genename as display xref if the master xref it is dependent... · f1bde2f1
  Magali Ruffier authored 12 years ago
  f1bde2f1
Sep 10, 2012
- do not run only on pre databases · ccefe526
  Magali Ruffier authored 12 years ago
  
  ccefe526
Sep 06, 2012
- no need to use a hash of the species name when the species name is hard-coded · 681a74a9
  Magali Ruffier authored 13 years ago
  
  681a74a9
- special trick to store features on Y · b0383f05
  Magali Ruffier authored 13 years ago
  
  b0383f05
- space after platyfish removed · 4b9ac002
  Rishi Nag authored 13 years ago
  
  4b9ac002
Sep 05, 2012
- Added sources for Nasonia vitripennis (jewel wasp). · c684fb12
  Derek Wilson authored 13 years ago
  
  c684fb12
- The old way was possibly the WORST way to blank a LRU cache by replacing it... · 88df9e0c
  Andy Yates authored 13 years ago
  88df9e0c
- Foreach better than while .. i think · 169c6359
  Andy Yates authored 13 years ago
  
  169c6359
- Added pongo pyg thingy as an alias so the xrefs work for one source · 1b043f07
  Andy Yates authored 13 years ago
  
  1b043f07
Sep 04, 2012
- added empty line before =cut · 9906332e
  Nathan Johnson authored 13 years ago
  
  9906332e
- get_slice method specific for gene count · 21fb32c8
  Magali Ruffier authored 13 years ago
  21fb32c8
- get_slice method added · dc87fe33
  Magali Ruffier authored 13 years ago
  
  dc87fe33
- memory requirements adjusted in regard to latest pipeline runs · 25edd30b
  Magali Ruffier authored 13 years ago
  
  25edd30b
Sep 03, 2012
- Adding patch from James Allen where a copy/paste bug has meant the incorrect... · 32f91221
  Andy Yates authored 13 years ago
  32f91221
Aug 30, 2012
- wrong database name used · 55a943ee
  Magali Ruffier authored 13 years ago
  55a943ee
Aug 29, 2012
- misc-scripts/xref_mapping/XrefParser/curated_transcriptParser.pm · dc14f5ab
  Andy Yates authored 13 years ago
  
  dc14f5ab
- Added correct logic name. Production DB also updated. · 6d9675e2
  Kieron Taylor authored 13 years ago
  
  6d9675e2
- added failsafe, do not get repeat features if slice is too big · 6b1e0236
  Magali Ruffier authored 13 years ago
  
  6b1e0236
- some disconnection for safety · 3df1c466
  Magali Ruffier authored 13 years ago
  
  3df1c466
Aug 24, 2012
- Unfinished first effort at script. · 2874f1e1
  Kieron Taylor authored 13 years ago
  2874f1e1
Aug 23, 2012
- got the key and value inverted · e2ffd2b6
  Magali Ruffier authored 13 years ago
  
  e2ffd2b6
- Delete uniparc xrefs and object_xrefs before uploading the mappings · 35260774
  Andy Yates authored 13 years ago
  
  35260774
Aug 22, 2012
- Added original stable ID for reference. · ff80df6e
  Kieron Taylor authored 13 years ago
  
  ff80df6e