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This enables to have multiple sources of GO terms. The GO terms extracted
from the GFF file will be processed as 'DIRECT' xrefs linked to genes

	formatting

	safe use of @aliases (don't expect registry to make copy of the list)

	quote argument names and values

Add gene_score_threshold (0.125).

(zero by default in the code, but set to 0.125 in the default.conf
configuration file).

found in get_adaptor().  Suggested by jm18 on dev.

Also reformat get_alias() and get_DBAdaptor().

table to the SQL file.

Bio::EnsEMBL::IdMapping::InternalIdMapper::EnsemblTranscriptGeneric::biotype
to plugins to run.

EnsemblGeneGeneric.pm

method in GeneScoreBuilder.pm