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Django package containing chebi models.

ETL to migrate data from the old database to the new one

SMBGC detection tool

FunPDBe Validator client that can parse and validate FunPDBe JSON files

A basic Python-based EGA download client

This is the python implementation of CEN-tools, an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens

CEN-tools is an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens.

Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.

Europe PMC Annotated Fulltext Corpus of 300 articles for core entity types (Gene/Proteins, Diseases and Species)

EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource

Test libraries and harnesses used for running the Ensembl test suite

An Ansible playbook for automated deployment of full-stack Plone servers.

A Learning Based Formulation of Parametric Curve Fitting for Bioimage Analysis.