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Quick demonstration of server that displays indications sections of DailyMed structured product labels (SPLs, i.e. drug labels). The SPLs are exposed in their own URLs which serve as a static location so that they can be annotated with hypothes.is.

An Ansible playbook for automated deployment of full-stack Plone servers.

This repo contains the code to analyse the data for assemblies manuscript

PDBeCIF is a lightweight pure python package for manipulating mmCIF formatted files distributed by the wwPDB. The package contains objects and modules for accessing mmCIF data. The documentation can be found at: http://pdbe.gitdocs.ebi.ac.uk/PDBeCIF/

A nextflow pipeline for polygenic score calculation

A solution to enable building and managing a Spark/Hadoop cluster on the EMBL-EBI Codon Slurm HPC cluster

A few starter examples of ansible playbooks, to show features and how they work together. See http://galaxy.ansible.com for example roles from the Ansible community for deploying many popular applications.