Explore projects

Docker projects for bioinformatics tools

Quick demonstration of server that displays indications sections of DailyMed structured product labels (SPLs, i.e. drug labels). The SPLs are exposed in their own URLs which serve as a static location so that they can be annotated with hypothes.is.

This project defines a delayed job that runs biological sequence searches (BLAST).

Angular authentication library for EBI's AAP. It uses JWT tokens for identification.

Documentation: http://tools-glue.gitdocs.ebi.ac.uk/ng-ebi-authorization/

This package complements the performance evaluation for the manuscript entitled "Use of viral motif mimicry improves the proteome-wide discovery of human linear motifs"

HAproxy image that autoreconfigures itself when used in Docker Cloud

A simple API that runs delayed jobs. It allows to submit a job and check it's status. When a job finishes it saves the results in the NFS.

Code repository for Docker Bootcamp, published By Packt

Scripts for drupal local development using docker - intended to be a submodule mounted as /bin in drupal repo

Terraform scripts for setting up a development environment in Embassy for the Marine Metagenomics folks

Job that generates an image of a heatmap to use it as a guide for the visualisation.

Contenxtual Annotations Pipeline with Tagging and Linking (CAPITAL)

attempting to run Cactus in the cloud

A solution to enable building and managing a Spark/Hadoop cluster on the EMBL-EBI Codon Slurm HPC cluster