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Django package containing chebi models.

FunPDBe Validator client that can parse and validate FunPDBe JSON files

CEN-tools is an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens.

This is the python implementation of CEN-tools, an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens

Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.

SMBGC detection tool

A basic Python-based EGA download client

Singularity in HPC

ChEBI data in different formats: TSV, SDF and SQL Dumps

Joint workshop on programmatic access and web components offered by PDBe and UniProt

ChEBI database management

This project defines a delayed job that runs structure searches (similarity, substructure, connectivity).

PDBeCIF is a lightweight pure python package for manipulating mmCIF formatted files distributed by the wwPDB. The package contains objects and modules for accessing mmCIF data. The documentation can be found at: http://pdbe.gitdocs.ebi.ac.uk/PDBeCIF/