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A few starter examples of ansible playbooks, to show features and how they work together. See http://galaxy.ansible.com for example roles from the Ansible community for deploying many popular applications.

An Ansible playbook for automated deployment of full-stack Plone servers.

This repo contains the code to analyse the data for assemblies manuscript

This repo contains the code to analyse the data for assemblies manuscript

Forked from https://github.com/jerrylin0809/pac-bayesian-dendrogram-cut.git

ci/cd and k8s example

This project defines a delayed job that runs biological sequence searches (BLAST).

BioPython with some changes I am making in the PDB package to fit best to my projects

Small molecules chemistry toolkit. Documentation is available at Gitlab pages: https://pdbe.gitdocs.ebi.ac.uk/ccdutils/

CEN-tools is an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens.

This is the python implementation of CEN-tools, an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens.

This is the python implementation of CEN-tools, an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens

Project to perform the data indexation process to the ChEBI platform

ETL to migrate data from the old database to the new one

This is a repository to test the viability of using ChEBI Ontology + FastAPI + Robot in order to program the Advanced Search functionality.

Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.