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ETL to migrate data from the old database to the new one

SMBGC detection tool

A basic Python-based EGA download client

This is the python implementation of CEN-tools, an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens

CEN-tools is an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens.

Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.

Europe PMC Annotated Fulltext Corpus of 300 articles for core entity types (Gene/Proteins, Diseases and Species)

EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource

Test libraries and harnesses used for running the Ensembl test suite

An Ansible playbook for automated deployment of full-stack Plone servers.

A Learning Based Formulation of Parametric Curve Fitting for Bioimage Analysis.

Workflows as a Service

Soon-to-be-legacy templates generating pipeline. CSA-3D will replace it eventually