Merge requests · ensembl-gh-mirror

Escape seq_region_name before querying the synonyms

ensembl!185 · created Mar 02, 2017 by Marek Szuba master
- Merged
- 6
updated Mar 03, 2017
use depth and master branch when cloning in INSTALL.pl

Bio-DB-HTS!16 · created May 10, 2016 by Marek Szuba master
- Merged
updated May 10, 2016
Fix in mapper for insertion SeqEdits

ensembl!182 · created Feb 01, 2017 by Marek Szuba master
- Merged
- 4
updated Feb 22, 2017
Update insert sql for protein_feature to avoid duplicate unique keys

ensembl!112 · created Jan 18, 2016 by Marek Szuba master
- Merged
- 2
updated Jan 26, 2016
0000-00-00 00:00:00 -> CURRENT_TIMESTAMP

ensembl!35 · created Nov 11, 2014 by Marek Szuba master
- Closed
- 2
updated Nov 14, 2014
Update example files.

ensembl!67 · created May 08, 2015 by Marek Szuba master
- Merged
- 2
updated May 08, 2015
changes just for vega (wanted on both 75 and master)

ensembl!12 · created Apr 22, 2014 by Marek Szuba master
- Closed
updated Apr 22, 2014
Fixing the test suite and bits of io

ensembl-io!33 · created Mar 23, 2016 by Marek Szuba master
- Closed
- 10
updated Apr 19, 2017
bugfix: get_all_DBAdaptors() should return an empty list if the species name (alias) does not exist

ensembl!141 · created Jun 24, 2016 by Marek Szuba master
- Merged
- 6
updated Jul 05, 2016
Feature/fetch sequence

ensembl-otter!16 · created Jan 03, 2019 by Marek Szuba master
- Merged
updated Jan 24, 2019
Test/transcript mapper

ensembl!130 · created May 06, 2016 by Marek Szuba master
- Merged
- 3
updated Sep 13, 2016
Switching to a tied hash instance versus blessed hash.

ensembl!85 · created Sep 04, 2015 by Marek Szuba master
- Closed
updated Sep 04, 2015
Do not skip first mapping when making chain file

ensembl!184 · created Feb 15, 2017 by Marek Szuba master
- Merged
- 3
updated Feb 22, 2017
Updated caching

ensembl!30 · created Oct 16, 2014 by Marek Szuba master
- Merged
updated Oct 21, 2014
Fixed fetch_all_by_Slice_and_external_dbname_link

ensembl!78 · created Aug 07, 2015 by Marek Szuba master
- Merged
updated Aug 12, 2015
Yearly copyright update

webvm-deps!1 · created Mar 12, 2019 by Marek Szuba master
- Merged
updated Mar 19, 2019
Remove unnecessary dependencies

ensembl-io!24 · created Dec 11, 2015 by Marek Szuba master
- Merged
updated Dec 11, 2015
Fixed the Apache2 tests

ensembl-test!10 · created Nov 29, 2016 by Marek Szuba master
- Merged
- 2
updated Nov 30, 2016
Removed method 'set_source_id_to_external_name' to revert back to the default behaviour which is to report the display db name in the source field of the gene description.

ensembl!42 · created Nov 27, 2014 by Marek Szuba master
- Merged
- 1
updated Nov 27, 2014
Fixed password issue with special characters

ensembl-otter!8 · created Nov 13, 2018 by Marek Szuba master
- Merged
updated Nov 13, 2018