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This project is mirrored from https://:*****@github.com/Ensembl/ensembl-hive.git. Pull mirroring updated .
  1. Jan 16, 2015
  2. Jan 05, 2015
  3. Dec 22, 2014
  4. Nov 05, 2014
  5. Oct 29, 2014
  6. Oct 27, 2014
  7. Oct 25, 2014
    • Matthieu Muffato's avatar
      Pulling in two bugfixes from version/2.1 · e56909c5
      Matthieu Muffato authored
        bugfix: jobs could not trigger MEMLIMIT events
        bugfix: release the unfinished batch if the worker is contaminated
      e56909c5
    • Matthieu Muffato's avatar
      bugfix: jobs could not trigger MEMLIMIT events · 91de34e4
      Matthieu Muffato authored
      (and probably RUNLIMIT as well)
      The problem was in Queen::register_worker_death(). The code fetches the
      current role, finalizes it, and then updates the worker table. The role
      that is fetched from the database with fetch_last_unfinished_by_worker_id()
      is not connected to any workers and later, when
      AnalysisJobAdaptor::release_undone_jobs_from_role() needs to know the cause
      of death and the number of work done by the worker, the role would load
      another instance of the worker using the information currently stored in
      the database, that is: before it has been updated.
      Hence, the code was complaining that cause_of_death was not populated.
      By associating the role to the worker, we allow the method to read the
      existing information
      91de34e4
    • Matthieu Muffato's avatar
      bugfix: release the unfinished batch if the worker is contaminated · 1c4579c9
      Matthieu Muffato authored
      This is done by setting "self_burial" to 0
      1c4579c9
  8. Oct 21, 2014
  9. Oct 20, 2014
  10. Oct 17, 2014
  11. Oct 16, 2014