Merge requests · ensembl-gh-mirror / ensembl-io · GitLab

Support parsing from an already open file handle.

!17 · created Aug 18, 2015 by Marek Szuba master
enhancement
- Merged
- 5
updated Aug 20, 2015
Adding travis-ci tests

!15 · created Aug 18, 2015 by Marek Szuba master
enhancement
- Merged
- 1
updated Aug 20, 2015
- Fixed bug in Fasta parser, where if the sequence wasn't accessed wh…

!21 · created Nov 11, 2015 by Marek Szuba master
- Merged
- 9
updated Dec 17, 2018
Respect the html parameter in trackDb file

!19 · created Oct 06, 2015 by Marek Szuba master
- Merged
updated Oct 07, 2015
Do not inherit parent html if track has its own html in hubs

!20 · created Oct 08, 2015 by Marek Szuba master
- Closed
- 4
updated Mar 24, 2016
Fix for bug in GTF get_attribute_by_name

!18 · created Aug 21, 2015 by Marek Szuba master
- Merged
updated Aug 21, 2015
Update BaseVCF4.pm

!12 · created Jun 18, 2015 by Marek Szuba master
- Closed
- 4
updated Aug 20, 2015
fix when individual_ids not defined

!5 · created Mar 30, 2015 by Marek Szuba master
- Merged
updated Mar 30, 2015
fix misuse of get_alternatives in get_start

!3 · created Oct 24, 2014 by Marek Szuba variation
- Merged
updated Oct 24, 2014
add non_ref_only option when fetching genotypes

!10 · created Jun 01, 2015 by Marek Szuba master
- Merged
updated Jun 02, 2015
License was not correct. This is an Apache2 project.

!14 · created Aug 17, 2015 by Marek Szuba master
enhancement
- Merged
- 1
updated Aug 20, 2015
Non-extended summary retrieval for BigWigs.

!8 · created Apr 13, 2015 by Dan Sheppard master
- Merged
updated Apr 23, 2015
Keeping core API dependencies to a minimum

!16 · created Aug 18, 2015 by Marek Szuba master
enhancement
- Merged
- 1
updated Aug 20, 2015
Fix trackDb absolute url bug.

!7 · created Apr 07, 2015 by Dan Sheppard master
- Merged
updated Apr 08, 2015
ENSWEB-1560: Overzealous caching of sample ids.

!13 · created Aug 14, 2015 by Dan Sheppard postreleasefix/81
- Merged
updated Aug 14, 2015
fix for slightly clumsy passing of args to synonym methods

!11 · created Jun 02, 2015 by Marek Szuba master
- Merged
updated Jun 02, 2015
Feature/blast parser

!1 · created Jul 11, 2014 by Marek Szuba master
- Merged
updated Dec 17, 2018
Duplicate all methods that relate to individual data in a VCF file.

!9 · created May 19, 2015 by Marek Szuba master
- Merged
updated May 19, 2015
Add some new features and fixes for the VCF backend code in the Variation API

!2 · created Oct 08, 2014 by Marek Szuba variation
- Merged
updated Oct 08, 2014
fix when individual_ids not defined

!6 · created Mar 30, 2015 by Marek Szuba release/79
- Merged
updated Mar 30, 2015

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