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ensembl-gh-mirror
ensembl
Commits
c2e391cd
Commit
c2e391cd
authored
19 years ago
by
Glenn Proctor
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regulatory_feature_object now has influence column as well
parent
2fec6d35
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misc-scripts/regulatory_regions/load_regulatory.pl
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c2e391cd
...
...
@@ -125,8 +125,10 @@ while (<FILE>) {
# for miRNA_target (and possibly others) where individual features don't
# have a unique name, create a composite one. Also set influence for each type.
my
$feature_name
;
my
$influence
;
if
(
$feature
=~
/miRNA_target/i
)
{
$feature_name
=
$id
.
"
:
"
.
$seq
;
$influence
=
"
negative
";
}
print
STDERR
"
No feature name for
$seq
of type
$feature
on
$id
.
\n
"
if
(
!
$feature_name
);
...
...
@@ -149,6 +151,7 @@ while (<FILE>) {
$rr_obj_sth
->
execute
(
$rr_id
,
$ensembl_type
,
$ensembl_object
->
dbID
(),
$influence
,
"");
# no evidence yet
$count
++
;
...
...
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