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- Nov 30, 2007
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
Change a croak() into a carp(). Status interval at 30s. Store the stable ID as the accession for the Name.
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
ignore any name that is the same but with a different case variation.
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Ian Longden authored
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
These are parsed earlier in the pipeline and we should not add these accessions as Xrefs, and we should only add direct Xrefs to them if they exists since previously.
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Ian Longden authored
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- Nov 29, 2007
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Glenn Proctor authored
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
gene names will upset things (non-unique index entries for e.g. 'mio' and 'Mio').
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Andreas Kusalananda Kähäri authored
Pretty summary. Pretty status log every 10s. Done.
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Andreas Kusalananda Kähäri authored
once.
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
Will try to store Xrefs more than once.
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Andreas Kusalananda Kähäri authored
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- Nov 28, 2007
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Ian Longden authored
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Ian Longden authored
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Ian Longden authored
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Ian Longden authored
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Ian Longden authored
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Andreas Kusalananda Kähäri authored
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Ian Longden authored
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- Nov 27, 2007
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Ian Longden authored
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Ian Longden authored
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Ian Longden authored
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Andreas Kusalananda Kähäri authored
Does not yet do anything useful, only parses the lines and makes a fancy data structure of each of them.
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- Nov 23, 2007
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Andreas Kusalananda Kähäri authored
Store the password in an anonymous subroutine that will return the password when invoked. This will prevent the password from being accidentally displayed when using e.g. Data::Dumper on a structure containing one of these objects.
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Andreas Kusalananda Kähäri authored
Nicify code and comments of the methods at the end.
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- Nov 22, 2007
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Bronwen Aken authored
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Ian Longden authored
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- Nov 21, 2007
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Glenn Proctor authored
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Daniel Rios authored
added new method to retrieve the AlleleFeature associated with the VariationFeature in the StrainSlice object, mainly for use in web
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Andreas Kusalananda Kähäri authored
Wrong method name in POD heading for fetch_all_by_Slice_and_external_dbname_link(). Make POD lines slightly shorter for same method.
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Glenn Proctor authored
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Glenn Proctor authored
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Daniel Rios authored
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Bronwen Aken authored
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