no clone coordinate system in mouse exists in the new assembly, don't project to clone for mouse either

Removed synonym data source. MGI have combined the data into the single file. Note: Used to be a bulky SQL download, now just Tab-separated.

Adding the xref schema changes from core. I've done a cursory glance through the xref code. Looks like all inserts should be ok

ENSCORESW-138. Fixed the encoded entities by de-encoding them. Code is untested though and should be treated with caution

change to allow overriding of the default exonerate method for multiple sources with the same name http://www.ebi.ac.uk/panda/jira/browse/ENSCORESW-134

replaced methods ExonerateGappedBest1_agam and ExonerateGappedBest1_culex with ExonerateGappedBest1_55_perc_id

Fixed PUBMED::culex_quinquefasciatus; added three plants species, setaria_italica solanum_lycopersicum oryza_brachyantha

Do not quote identifiers if they are going into a prepared statement. Otherwise we end up with odd results