Explore projects

This script provides a number of user enhancements to the default interface of RT at EBI, to enable quicker and easier management of tickets.

ETL to migrate data from the old database to the new one

Django package containing chebi models.

Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.

Ensembl 2020 client

FunPDBe Validator client that can parse and validate FunPDBe JSON files

Europe PMC Annotated Fulltext Corpus of 300 articles for core entity types (Gene/Proteins, Diseases and Species)

A basic Python-based EGA download client

Manuscript submission system project (Europe PMC plus)

The EMBL-EBI Visual Framework for websites and services.

NOTE - DO NOT COMMIT ANYTHING IN THIS REPO, THIS IS MIRROR REPO OF GITHUB. PLEASE COMMIT CHANGES, TAGGING IN GITHUB ONLY.

A project to host reports and interactive visualisations for Europe PMC

SMBGC detection tool

In this repository, I am going to share all the data and codes required to reproduce my library gene selection steps for the 2D CRISPR Project (Colorectal and Breast cancer cell lines)

A library for locating and annotating plain text in HTML