Commits · 3ea2f3669bfaa90886709f0825e0fed44d6c0fc3 · ensembl-gh-mirror / ensembl

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Sep 01, 2008

added new tests to check attributes db_name and db_display_name work properly... · 3ea2f366

Daniel Rios authored 16 years ago

added new tests to check attributes db_name and db_display_name work properly to retrieve the database_name and the displayable_name from the external database

3ea2f366

Aug 19, 2008
- added 2 new tests for the fetch_all_by_biotype method · eb7fc05b
  Daniel Rios authored 16 years ago
  
  eb7fc05b
Aug 13, 2008
- added new column external_data for user upload database · 5a913005
  Daniel Rios authored 16 years ago
  
  5a913005
Jul 24, 2008
- Eh, 'assembly.default' is defnitly a species specific key. · 290ef29d
  Andreas Kusalananda Kähäri authored 16 years ago
  
  290ef29d
- Add the species_id column to the meta and coord_system test data sets. · b885ee7e
  Andreas Kusalananda Kähäri authored 16 years ago
  
  b885ee7e
- Update test table schemas for 'meta' and 'coord_system' tables using · 270606e9
  Andreas Kusalananda Kähäri authored 16 years ago
```
current ensembl/sql/table.sql.
```
  270606e9
Jul 22, 2008
- added canonical_transcript information in a gene for testing purposes · bfcfa1c6
  Daniel Rios authored 16 years ago
  
  bfcfa1c6
- added tests to check canonical_transcript information in gene · bd12a99c
  Daniel Rios authored 16 years ago
  
  bd12a99c
- tested 2 new methods: to get db_name for an external_db_id and fetch... · 9eb72a87
  Daniel Rios authored 16 years ago
```
tested 2 new methods: to get db_name for an external_db_id and fetch db_entries for a source (db_name)
```
  9eb72a87
Jul 18, 2008
- hit_id -> hit_name · 20d92006
  Glenn Proctor authored 16 years ago
  
  20d92006
Jul 16, 2008
- linkage_type added · 189ab7d6
  Ian Longden authored 16 years ago
  
  189ab7d6
- canonical transcript now added to gene · a6ae5010
  Ian Longden authored 16 years ago
  
  a6ae5010
- release 50 now · 887fd796
  Ian Longden authored 16 years ago
  
  887fd796
- new tables · 728c16a1
  Ian Longden authored 16 years ago
  
  728c16a1
Jan 28, 2008
- zip file no longer used but individual files used for easy modifications/updates · ee0c8cb9
  Ian Longden authored 17 years ago
  
  ee0c8cb9
- new version update · 32048a6f
  Ian Longden authored 17 years ago
  
  32048a6f
- removing old test · 10113ced
  Ian Longden authored 17 years ago
  
  10113ced
- removed regulatory calls · 077ec5b4
  Ian Longden authored 17 years ago
  
  077ec5b4
- regulatory stuff moved to seperate database · 56f2806c
  Ian Longden authored 17 years ago
  
  56f2806c
Oct 29, 2007
- set two genes to have source vega for testing · 7124b19b
  Ian Longden authored 17 years ago
  
  7124b19b
Oct 12, 2007
- changed test to test for optional code name to be passed to fetch_all_by_ and remove_from_ · 9ba4767a
  Ian Longden authored 17 years ago
  
  9ba4767a
Sep 20, 2007
- test changes for addition of external_db_id and hcoverage to XXXalignfeatures. · a8fa4455
  Ian Longden authored 17 years ago
  
  a8fa4455
Jul 27, 2007
- Added extra columns for secondary_db_name, secondary_db_table. · 1106e51a
  Glenn Proctor authored 17 years ago
  
  1106e51a
Jul 12, 2007
- Added secondary_db_name and secondary_db_table columns. · de5bd247
  Glenn Proctor authored 17 years ago
  
  de5bd247
Jul 05, 2007
- Added API support and regression testing for go_xref.source_xref_id data · 4742ea17
  Will Spooner authored 17 years ago
  
  4742ea17
- Updates due to go_xref schema change · f2c64123
  Will Spooner authored 17 years ago
  
  f2c64123
- 45->46 · 1f760285
  Ian Longden authored 17 years ago
  
  1f760285
Jun 04, 2007
- tests for new and rewritten methods · 8005e93b
  Patrick Meidl authored 17 years ago
  
  8005e93b
May 31, 2007
- updated release number · e703a9c1
  Ian Longden authored 17 years ago
  
  e703a9c1
Apr 16, 2007
- test data changed for external_db type checks · 260a9a57
  Ian Longden authored 17 years ago
  
  260a9a57
Apr 13, 2007
- added test for optional info_type to get_all_db(Entries/Links) for translation, transcript and gene · e14eee62
  Ian Longden authored 17 years ago
  
  e14eee62
- Keeping sql and txt unzipped now for better maintainabillity in cvs · 4eb861ca
  Ian Longden authored 17 years ago
  
  4eb861ca
Apr 11, 2007
- release number changed 42-> 44 · 5c4b79cd
  Ian Longden authored 17 years ago
  
  5c4b79cd
Apr 03, 2007
- Added tests for cdna_start(), cdna_end(), genomic_start(), and · 0db47390
  Andreas Kusalananda Kähäri authored 18 years ago
```
genomic_end() on translations.

Current API and test DB passes the tests.
```
  0db47390
- Added tests for cdna_start(), cdna_end(), cdna_coding_start(), · f249611d
  Andreas Kusalananda Kähäri authored 18 years ago
```
cdna_coding_end(), coding_region_start(), and coding_region_end() on
exons.

Current API and test DB passes the tests.
```
  f249611d
Mar 07, 2007
- Added test for type storing and retrieval. · edfe5f88
  Glenn Proctor authored 18 years ago
  
  edfe5f88
- Typo. · f2e0d636
  Glenn Proctor authored 18 years ago
  
  f2e0d636
- Added type column to external_db · e1a6c94b
  Glenn Proctor authored 18 years ago
  
  e1a6c94b
Feb 19, 2007
- Added test for store_assembly method · 9020ef6f
  Will Spooner authored 18 years ago
  
  9020ef6f
Feb 12, 2007
- added test for add_ProteinFeature · 433c6544
  Patrick Meidl authored 18 years ago
  
  433c6544