Commits · 805aca4c80b9f35f1fb563b10cdcab9a2e7383a2 · ensembl-gh-mirror / ensembl-hive

This project is mirrored from https://:*****@github.com/Ensembl/ensembl-hive.git. Pull mirroring updated 3 minutes ago.

May 31, 2012
- moved run_job_id into a separate variable for clarity · 805aca4c
  Leo Gordon authored 12 years ago
  
  805aca4c
May 30, 2012
- updated POD about new()'s arguments · d169b5b1
  Leo Gordon authored 12 years ago
  
  d169b5b1
- SemaphoreBoxes colours moved under "Colours" section · 22794860
  Leo Gordon authored 12 years ago
  
  22794860
- A personal ~/.hive_config.json will be merged in by default (overriding system defaults) · 0550d9ea
  Leo Gordon authored 12 years ago
  
  0550d9ea
- removed reference to the deleted Util::Graph::Config · f1202d7c
  Leo Gordon authored 12 years ago
  
  f1202d7c
- allow configuring boxes' colourscheme/offset from hive_config.json · 71125626
  Leo Gordon authored 12 years ago
  
  71125626
- switching to using the new configuration file+parser · 3821ae80
  Leo Gordon authored 12 years ago
  
  3821ae80
- a new JSON-based configuration file and parser · d6bb2bf4
  Leo Gordon authored 12 years ago
  
  d6bb2bf4
May 28, 2012
- new changelog incorporated into README · c4e7aecf
  Leo Gordon authored 12 years ago
  
  lg4_pre_rel_68_20120528_multimeadow_aware
  
  c4e7aecf
- schema change to allow any short string for meadow_type · 300e8277
  Leo Gordon authored 12 years ago
  
  300e8277
- schema change to allow any short string for meadow_type · 984f64c2
  Leo Gordon authored 12 years ago
  
  984f64c2
May 23, 2012
- a Valley-wide (potentially multi-meadow) garbage collector · 519c6e33
  Leo Gordon authored 12 years ago
  
  519c6e33
- bugfix: schedule_workers_resync_if_necessary should now be run with a $valley argument · 3f1b4576
  Leo Gordon authored 12 years ago
  
  3f1b4576
- pipeline_name now gets propagated to all meadows of the Valley (preparatory) · 32708ea6
  Leo Gordon authored 12 years ago
  
  32708ea6
- reuse the meadow->name() method to check for availability [cleanup] · 394ad647
  Leo Gordon authored 12 years ago
  
  394ad647
- pass in a Valley instead of the current_meadow (preparatory) · 37e63c93
  Leo Gordon authored 12 years ago
  
  37e63c93
May 22, 2012
- kill-worker-process-by-worker-id: simplified specific Meadow code by moving... · 21c06220
  Leo Gordon authored 12 years ago
```
kill-worker-process-by-worker-id: simplified specific Meadow code by moving general checks out of them
```
  21c06220
- the Meadow hash is now by type, so no need to iterate to find Meadow-by-Worker · 3fcd5f98
  Leo Gordon authored 12 years ago
  
  3fcd5f98
- untangling a bit. Queen does not need to re-sync and beekeeper does not need to fetch · 60f1d5e5
  Leo Gordon authored 12 years ago
  
  60f1d5e5
- simplified output interface from schedule_workers and schedule_workers_resync_if_necessary · 2af05379
  Leo Gordon authored 12 years ago
  
  2af05379
May 21, 2012
- valley now contains available meadow objects, not classes; beekeeper contains... · 2dcf5e7d
  Leo Gordon authored 12 years ago
```
valley now contains available meadow objects, not classes; beekeeper contains corrected algorithm for killing a worker
```
  2dcf5e7d
May 18, 2012
- added schema and API support for meadow_name · 229783f5
  Leo Gordon authored 12 years ago
  
  229783f5
- fixed a typo bug · 8b2f8d26
  Leo Gordon authored 12 years ago
  
  lg4_post_rel67_20120518_pre_meadow_name
  
  8b2f8d26
May 17, 2012
- rename meadow_name to meadow_type to match the rest of the repository, before it is too late · 8f430089
  Leo Gordon authored 12 years ago
  
  8f430089
May 12, 2012
- moved meadow identification code to Valley.pm · 16997244
  Leo Gordon authored 12 years ago
  
  16997244
May 11, 2012
- moved the "meadow-collection" code into a separate class called "Valley" · 0cab5341
  Leo Gordon authored 12 years ago
  
  0cab5341
- a new class to represent a collection of available Meadows · a8d596d6
  Leo Gordon authored 12 years ago
  
  a8d596d6
May 10, 2012
- removed obsolete -maximise_concurrency and -batch_size options from both scripts · 18dfceb0
  Leo Gordon authored 12 years ago
  
  18dfceb0
May 09, 2012

bugfix+feature: -local_cpus renamed into -total_workers_max and so made... · 346613a2

Leo Gordon authored 12 years ago

bugfix+feature: -local_cpus renamed into -total_workers_max and so made available for any meadow (not just LOCAL). Plus some renames

346613a2

May 08, 2012
- make beekeeper more Meadow-agnostic and allow it to automatically find... · 337fee35
  Leo Gordon authored 12 years ago
```
make beekeeper more Meadow-agnostic and allow it to automatically find alternative Meadow modules in the INC list
```
  337fee35
- check the availability of this Meadow on the given machine · 364d341e
  Leo Gordon authored 12 years ago
  
  364d341e
- new function for finding all modules in a "directory" across the whole INC list · ad03106b
  Leo Gordon authored 12 years ago
  
  ad03106b
May 02, 2012
- removed create_rule() method that is no longer used · da4b0bb0
  Leo Gordon authored 12 years ago
  
  da4b0bb0
- explicit new->store rules; retiring create_rule(); switch to using toString() · 2929ae1a
  Leo Gordon authored 12 years ago
  
  2929ae1a
- switch to using uniform toString() diagnostic method · 82b427c0
  Leo Gordon authored 12 years ago
  
  82b427c0
- move input_id_template stringification into DFR class · 2416bd72
  Leo Gordon authored 12 years ago
  
  2416bd72
May 01, 2012
- remove_by_condition_analysis_url() is no longer used by Compara, so has been removed · 0cbb4afd
  Leo Gordon authored 12 years ago
  
  0cbb4afd
- a Process does not need a reference to the Queen · 8811e268
  Leo Gordon authored 12 years ago
  
  8811e268
- analyze_tables() does not seem to be used anymore · d622eaf3
  Leo Gordon authored 12 years ago
  
  d622eaf3
- bugfix: make sure runtime_msec is stored even when a job dies · e47201c5
  Leo Gordon authored 12 years ago
  
  e47201c5