and later into Ensembl release 50.

Added defaults for common usage mode.

#Changed transcript_probeset_count cache to use dbID instead of complete name
#Renamed check_names_match to validate_arrays and extended to perform probeset warning, external_db name guess and returns cache, user array param validation and association check
#Merged delete_unampped objects into delete_existing_xrefs due to dependency. Now throws if arrays param set until force_delete specified, deletes using IN list
#cache_arrays_per_probeset now uses arrays param to reduce size of cache
#removed unmapped_object dbID = 2000>
#Change all probe specific unmapped object to reeflect the individual probe rather than the probeset
#Updated logs
#Updated docs
#Added control of promiscuous probesets and unmapped objects

fetchrow_arrayref().

decrease the amount of code (slightly) in most of the feature-specific
sub-classes.

  Add missing ':' to 'RefSeq_dna:equus_caballus' in species section.

  Remove (comment out) non-existant source 'ncRNA::equus_caballus' from
  species section.


For pongo_pygmaeus:

  Replace non-existant source 'UniGene::pongo_pygmaeus' with
  'UniGene::MULTI' in species section.

Skip genes that are listed in Compara but aren't in the relevant core databases. Shouldn't be necessary in production runs but makes testing with previous Compara versions easier.

info for options added

default external_db_id to 11000 ('UCSC') manually.

Formatting.